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    #1 2022-02-21 11:59:11

    Louischarlc0
    Member
    Registered: 2020-07-21
    Posts: 58

    coordinating atoms

    Dear Prof Lu

    When I perform the NOCV analysis then I receive this message
    Error: Atom    1 of this fragment has evidently different coordinate to the corresponding atom (    1 ) of the whole system!
    X,Y,Z of atom    1 in this fragment:   0.07219  -2.10597   0.08904 Angstrom
    X,Y,Z of atom    1 in whole system:   15.38680   7.32820   7.74390 Angstrom

    How can I circumvent it?

    Thanks in advance

    Regards
    Louis-Charl

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    #2 2022-02-21 12:30:55

    sobereva
    Tian Lu (Multiwfn developer)
    From: Beijing
    Registered: 2017-09-11
    Posts: 1,468
    Website

    Re: coordinating atoms

    Dear Louis-Charl,

    In this analysis, the fragment coordinates should be directly extracted from the optimized complex coordinate, then conduct a single point task (its geometry should not be further optimized). In addition, if you use Gaussian, nosymm keyword should be used during the single point task to avoid Gaussian automatically translating and reorientating the fragment coordinate.

    Best regards,

    Tian

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