<![CDATA[Multiwfn forum / molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?id=638 Wed, 02 Mar 2022 16:03:56 +0000 FluxBB <![CDATA[Re: molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2336#p2336 As I had mentioned in Section 4.12.6 of Multiwfn manual, you can directly use Multiwfn to extract a cluster, VMD is not needed.

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Wed, 02 Mar 2022 16:03:56 +0000 http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2336#p2336
<![CDATA[Re: molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2335#p2335 I want to study the intermolecular interactions between neighboring molecules within a cluster.

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Wed, 02 Mar 2022 15:54:11 +0000 http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2335#p2335
<![CDATA[Re: molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2332#p2332 You didn't use the command at correct place, and I don't know what you want to do.

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Wed, 02 Mar 2022 12:26:05 +0000 http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2332#p2332
<![CDATA[Re: molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2331#p2331 The link below is what I got from VMD when I select an atom within the supercell cluster by following the steps in section 4.2 of the tutorial.
central-molecule.png

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Wed, 02 Mar 2022 09:59:06 +0000 http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2331#p2331
<![CDATA[Re: molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2329#p2329 Molden file is a plain text file. You can compress it and upload to a netdisk, then paste download link here.

Best,

Tian

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Tue, 01 Mar 2022 17:45:19 +0000 http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2329#p2329
<![CDATA[Re: molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2328#p2328 I'm struggling to upload the file. Maybe because its a notepad file.

Regards
Louis-Charl

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Tue, 01 Mar 2022 16:05:41 +0000 http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2328#p2328
<![CDATA[Re: molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2327#p2327 Dear Louis-Charl,

Please provide me your .molden file, I will check.

Multiwfn works for any kind of system.

Best,

Tian

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Tue, 01 Mar 2022 13:42:28 +0000 http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2327#p2327
<![CDATA[molden]]> http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2325#p2325 Dear Prof Lu

I followed the steps in section 4.1 of the tutorial and was able to generate a .molden file. As I was unable to open this molden file directly with multiwfn, I decided to edited it via notepad and enter the [cell] information that are supplied in this tutorial. However, I was still unable to open this file via multiwfn and found out that previous molden files e.g. A.molden, AT.molden etc. that I was able to open via multiwfn were also affected. Is this code only applicable for the H2O molecule that is described in the tutorial or can it be expanded to larger organic systems?

Thanks in advance

Regards
Louis-Charl

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Tue, 01 Mar 2022 12:03:49 +0000 http://www.shanxitv.org/wfnbbs/viewtopic.php?pid=2325#p2325
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